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PDBsum entry 4ay5
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Pore analysis for: 4ay5 calculated with  MOLE 2.0
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PDB id
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4ay5
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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11 pores,
coloured by radius |
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11 pores,
coloured by radius
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11 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.75 |
3.39 |
35.4 |
-2.11 |
-0.55 |
23.2 |
79 |
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3 |
4 |
6 |
2 |
0 |
1 |
0 |
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2 |
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2.76 |
3.11 |
35.5 |
-2.21 |
-0.59 |
23.2 |
81 |
3 |
4 |
7 |
2 |
0 |
1 |
0 |
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3 |
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2.12 |
3.18 |
41.0 |
-1.52 |
-0.16 |
19.1 |
83 |
6 |
2 |
3 |
7 |
0 |
2 |
0 |
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4 |
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2.79 |
2.88 |
45.5 |
-2.09 |
-0.60 |
20.1 |
81 |
4 |
5 |
8 |
2 |
0 |
3 |
0 |
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5 |
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2.42 |
2.88 |
46.5 |
-1.78 |
-0.32 |
19.4 |
87 |
5 |
2 |
6 |
3 |
0 |
2 |
0 |
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6 |
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2.33 |
3.62 |
50.1 |
-1.88 |
-0.56 |
20.7 |
80 |
4 |
4 |
8 |
2 |
0 |
3 |
0 |
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7 |
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2.35 |
3.60 |
94.0 |
-1.57 |
-0.50 |
18.8 |
86 |
5 |
7 |
11 |
6 |
0 |
3 |
0 |
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8 |
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1.92 |
2.02 |
168.8 |
-1.23 |
-0.35 |
20.6 |
84 |
12 |
9 |
9 |
15 |
1 |
0 |
0 |
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9 |
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1.90 |
2.06 |
176.4 |
-1.37 |
-0.24 |
20.2 |
83 |
16 |
9 |
10 |
17 |
1 |
4 |
0 |
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10 |
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2.76 |
3.29 |
37.1 |
-2.16 |
-0.58 |
22.8 |
81 |
3 |
4 |
7 |
2 |
0 |
1 |
0 |
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11 |
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2.28 |
3.57 |
40.3 |
-1.93 |
-0.54 |
22.9 |
81 |
3 |
3 |
7 |
2 |
0 |
1 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program