 |
PDBsum entry 4awj
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 4awj calculated with MOLE 2.0
|
PDB id
|
|
|
|
4awj
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
3 pores,
coloured by radius |
 |
6 pores,
coloured by radius
|
6 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.32 |
3.19 |
27.7 |
-1.17 |
-0.25 |
29.5 |
66 |
 |
3 |
4 |
0 |
6 |
1 |
1 |
0 |
 |
|
 |
 |
2 |
 |
1.56 |
2.69 |
36.3 |
-0.29 |
-0.06 |
15.1 |
83 |
4 |
3 |
2 |
5 |
2 |
0 |
0 |
CAS 77 F
|
 |
3 |
 |
1.35 |
1.36 |
42.4 |
-1.43 |
-0.63 |
10.8 |
93 |
2 |
1 |
5 |
2 |
0 |
0 |
0 |
|
 |
4 |
 |
1.81 |
2.02 |
49.8 |
-0.67 |
-0.26 |
17.2 |
77 |
4 |
6 |
2 |
5 |
2 |
3 |
0 |
CAS 77 C
|
 |
5 |
 |
1.37 |
1.37 |
53.1 |
-1.60 |
-0.26 |
25.1 |
82 |
7 |
6 |
2 |
2 |
2 |
0 |
0 |
CAS 77 C
|
 |
6 |
 |
1.33 |
1.38 |
66.3 |
-1.86 |
-0.39 |
26.4 |
79 |
8 |
7 |
2 |
4 |
1 |
3 |
0 |
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |