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PDBsum entry 4avc

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 4avc calculated with MOLE 2.0 PDB id
4avc
Pores calculated on whole structure Pores calculated excluding ligands

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5 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.04 2.04 52.5 0.21 -0.20 4.4 87 3 0 3 6 2 1 0  MSE 280 A MSE 317 A ACO 1334 A
2 1.26 1.38 81.9 -0.62 -0.18 13.7 79 7 1 3 8 4 3 0  MSE 196 B MSE 273 B MSE 280 B ACO 1334 B
3 1.59 1.76 99.6 -2.24 -0.59 27.5 80 8 9 4 5 5 1 0  MSE 273 B MSE 280 B MSE 302 B ACO 1334 B
4 1.33 1.56 147.0 -1.83 -0.45 25.7 82 11 9 5 8 4 2 0  MSE 196 B MSE 302 B ACO 1334 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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