 |
PDBsum entry 4atu
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 4atu calculated with  MOLE 2.0
|
PDB id
|
|
|
|
4atu
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pores calculated on whole structure |
|
Pores calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
7 pores,
coloured by radius |
|
6 pores,
coloured by radius
|
6 pores,
coloured as in
list below
|
|
|
|
|
|
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.29 |
1.59 |
44.2 |
-2.18 |
-0.55 |
26.5 |
81 |
|
5 |
5 |
2 |
3 |
1 |
1 |
0 |
|
|
 |
|
2 |
 |
1.38 |
1.38 |
60.5 |
-2.47 |
-0.63 |
30.8 |
78 |
5 |
6 |
1 |
0 |
0 |
3 |
1 |
|
|
3 |
 |
2.17 |
2.76 |
68.1 |
-2.86 |
-0.60 |
37.8 |
82 |
9 |
10 |
3 |
2 |
1 |
0 |
0 |
|
|
4 |
 |
1.28 |
1.34 |
86.6 |
-1.62 |
-0.42 |
24.1 |
80 |
8 |
11 |
3 |
5 |
0 |
4 |
1 |
|
|
5 |
 |
2.44 |
2.80 |
119.7 |
-1.87 |
-0.55 |
24.1 |
84 |
10 |
17 |
9 |
4 |
3 |
0 |
1 |
|
 |
6 |
 |
1.24 |
1.21 |
176.3 |
-1.63 |
-0.41 |
20.2 |
81 |
12 |
10 |
9 |
8 |
2 |
4 |
0 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program