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PDBsum entry 4aqb

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Blood clotting PDB id
4aqb
Contents
Protein chain
345 a.a.
Ligands
NAG-NAG-BMA-MAN-
MAN
NAG-NAG-BMA-MAN
Metals
_CA ×6
Waters ×5

References listed in PDB file
Key reference
Title Crystal structure and functional characterization of the complement regulator mannose-Binding lectin (mbl)/ficolin-Associated protein-1 (map-1).
Authors M.O.Skjoedt, P.Roversi, T.Hummelshøj, Y.Palarasah, A.Rosbjerg, S.Johnson, S.M.Lea, P.Garred.
Ref. J Biol Chem, 2012, 287, 32913-32921. [DOI no: 10.1074/jbc.M112.386680]
PubMed id 22854970
Abstract
The human lectin complement pathway activation molecules comprise mannose-binding lectin (MBL) and ficolin-1, -2, and -3 in complex with associated serine proteases MASP-1, -2, and -3 and the non-enzymatic small MBL associated protein or sMAP. Recently, a novel plasma protein named MBL/ficolin-associated protein-1 (MAP-1) was identified in humans. This protein is the result of a differential splicing of the MASP1 gene and includes the major part of the heavy chain but lacks the serine protease domain. We investigated the direct interactions of MAP-1 and MASP-3 with ficolin-3 and MBL using surface plasmon resonance and found affinities around 5 nm and 2.5 nm, respectively. We studied structural aspects of MAP-1 and could show by multi-angle laser light scattering that MAP-1 forms a calcium-dependent homodimer in solution. We were able to determine the crystal structure of MAP-1, which also contains a head-to-tail dimer ∼146 Å long. This structure of MAP-1 also enables modeling and assembly of the MASP-1 molecule in its entirety. Finally we found that MAP-1 competes with all three MASPs for ligand binding and is able to mediate a strong dose-dependent inhibitory effect on the lectin pathway activation, as measured by levels of C3 and C9.
PROCHECK
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