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PDBsum entry 4apj

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Top Page protein ligands metals Protein-protein interface(s) clefts links
Cleft analysis for: 4apj PDB id
4apj
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 9259.73 3.58 80.20 1 17.05 1 18.53 1 23 19 43 44 18 16 4 PE4 1629[A] (16 atoms)
2 2583.14 0.00 64.32 5 9.70 4 9.57 3 6 7 14 7 9 6 1  
3 1810.69 0.00 65.09 4 12.16 2 10.66 2 7 5 10 5 2 3 0  
4 1341.98 0.00 58.72 9 8.53 6 8.05 6 5 4 9 4 2 2 0  
5 978.75 0.00 67.28 2 11.94 3 8.21 4 5 3 2 4 3 2 0 PE4 1631[A] (14 atoms)
6 734.91 0.00 65.22 3 6.63 9 7.37 8 2 3 6 3 1 4 0  
7 811.27 0.00 62.26 6 9.24 5 8.03 7 3 5 3 1 3 0 0  
8 672.89 0.00 61.65 7 7.82 8 7.37 9 3 3 3 4 2 2 0  
9 538.31 0.00 58.53 10 5.44 10 6.72 10 2 2 3 1 1 1 0  
10 464.06 0.00 61.02 8 8.52 7 8.10 5 1 1 3 3 0 0 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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