PDBsum entry 4ap2 Go to PDB code:  Tunnel analysis for: 4ap2 calculated with MOLE 2.0 PDB id 4ap2 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.44 1.67 18.4 -0.54 0.10 15.9 75 3 0 0 4 1 1 0   2 1.43 1.67 24.9 -1.42 -0.16 25.0 80 4 3 0 2 1 1 0   3 1.27 2.06 19.5 2.41 0.87 0.9 74 0 0 0 8 3 0 0   4 1.21 1.26 24.0 1.05 0.38 8.3 71 1 1 1 7 3 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.