PDBsum entry 4akh Go to PDB code:  Tunnel analysis for: 4akh calculated with MOLE 2.0 PDB id 4akh Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   8 tunnels, coloured by tunnel radius 8 tunnels, coloured by tunnel radius 8 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.29 1.29 16.8 -0.80 -0.36 14.0 75 4 3 1 3 1 1 0   2 1.29 1.29 17.2 -0.37 -0.17 8.8 80 4 2 5 4 2 1 0   3 1.21 2.02 17.2 -0.39 0.39 5.8 66 2 0 1 3 4 0 0   4 1.18 2.02 17.7 -0.25 0.40 6.3 66 2 0 1 3 4 0 0   5 1.27 1.28 23.6 0.03 0.48 7.1 70 2 0 1 5 5 0 0   6 1.16 1.16 21.8 -0.89 0.08 18.3 73 2 1 1 8 1 0 0   7 1.61 2.65 15.1 -2.17 -0.63 19.7 96 1 1 4 1 0 0 0   8 1.12 1.70 20.2 -0.01 0.07 5.7 77 1 2 2 7 1 0 1   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.