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PDBsum entry 4ajt

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Tunnel analysis for: 4ajt calculated with MOLE 2.0 PDB id
4ajt
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.35 1.53 15.7 -0.95 0.00 14.2 76 3 2 0 2 1 0 0  
2 1.29 2.49 23.7 -1.43 -0.03 17.0 74 4 0 0 2 1 1 0  
3 1.20 2.00 17.0 0.74 0.15 6.9 73 1 1 1 5 0 2 0  
4 1.23 1.97 18.1 0.79 0.14 6.8 73 1 1 1 5 0 2 0  
5 1.52 3.47 15.6 0.56 0.22 10.0 86 1 1 3 4 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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