PDBsum entry 4agc Go to PDB code:  Tunnel analysis for: 4agc calculated with MOLE 2.0 PDB id 4agc Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.18 1.18 15.5 -0.21 -0.48 10.6 88 1 2 3 6 0 1 0   2 1.20 1.20 16.2 -0.60 -0.50 15.3 84 1 3 3 6 0 2 0   3 1.36 1.60 20.5 -0.41 0.12 8.3 81 3 1 1 4 2 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.