PDBsum entry 4aez

Pore analysis for: 4aez calculated with

MOLE 2.0

PDB id

4aez

Pores calculated on whole structure

Pores calculated excluding ligands

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16 pores, coloured by radius

16 pores, coloured by radius

16 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.89

2.19

26.2

-0.29

-0.19

2.6

86

1

0

5

5

1

0

0

2

1.80

3.29

30.6

-2.60

-0.53

17.5

83

4

0

5

1

0

3

0

3

1.91

2.96

41.9

-0.36

-0.11

4.9

87

1

1

8

8

1

2

0

4

2.10

2.10

55.0

-1.18

-0.29

18.0

87

7

5

7

3

2

1

0

5

1.64

1.63

61.3

-2.26

-0.73

17.4

82

4

2

8

2

0

1

1

6

2.83

4.26

70.8

-0.84

-0.34

9.8

86

2

4

10

7

2

2

0

7

2.87

3.43

73.0

-1.22

-0.34

18.6

87

6

4

7

7

1

1

0

8

2.79

4.23

73.1

-1.96

-0.40

25.6

85

7

8

5

4

2

1

0

9

2.14

2.14

77.4

-2.09

-0.67

19.5

86

3

10

7

3

2

2

0

10

2.24

4.26

104.4

-1.65

-0.47

18.0

82

8

4

8

4

2

3

0

11

1.63

1.74

114.5

-1.86

-0.54

20.2

86

7

7

13

6

3

2

0

12

2.14

2.17

127.2

-2.10

-0.50

21.7

84

7

10

9

9

2

2

0

13

1.22

3.21

142.2

-1.26

-0.41

14.0

86

7

7

12

7

2

1

0

14

2.06

2.06

172.7

-1.99

-0.50

24.3

86

14

12

10

5

2

0

0

15

1.63

2.64

181.3

-2.06

-0.62

21.1

86

11

14

14

4

2

1

0

16

1.98

2.60

185.0

-1.60

-0.52

15.9

85

9

11

15

8

3

1

0

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.