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PDBsum entry 4adf

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Pore analysis for: 4adf calculated with MOLE 2.0 PDB id
4adf
Pores calculated on whole structure Pores calculated excluding ligands

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29 pores, coloured by radius 32 pores, coloured by radius 32 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.23 1.23 30.3 -0.91 -0.36 8.0 79 1 3 3 4 0 2 0  
2 1.16 1.46 31.0 -0.49 0.01 15.6 90 3 2 2 3 3 0 0  
3 1.16 1.46 40.0 -0.49 -0.01 15.2 86 4 2 2 4 5 0 0  
4 1.18 1.45 47.3 -2.26 -0.44 32.3 81 8 6 1 3 1 0 0  
5 1.03 1.03 48.8 -1.69 -0.60 22.6 81 6 3 0 3 0 0 0  
6 2.97 3.23 57.4 -2.19 -0.50 29.6 80 8 6 1 2 0 1 0  
7 1.16 1.49 60.2 -1.90 -0.36 31.4 81 9 10 2 4 1 0 0  
8 1.57 2.61 63.5 -1.60 -0.52 23.1 83 7 4 1 3 2 0 0  
9 2.66 2.88 64.6 -2.27 -0.34 27.8 75 9 5 2 2 4 2 0  
10 1.04 1.04 65.4 -1.13 -0.48 19.0 81 4 4 1 3 1 1 0  
11 1.40 1.49 74.3 -1.15 -0.47 15.4 77 3 8 4 6 0 3 0  
12 1.20 1.49 76.2 -1.45 -0.47 23.8 81 7 8 2 4 4 0 0  
13 1.14 1.18 80.7 -1.36 -0.36 21.4 78 6 10 5 10 2 2 0  
14 1.18 1.16 93.6 -0.73 -0.43 12.4 80 3 7 5 9 2 2 0  
15 1.59 2.67 92.4 -2.07 -0.56 24.2 78 9 6 4 1 5 2 0  
16 1.18 1.14 110.0 -1.26 -0.38 18.9 81 9 7 5 10 1 2 0  
17 1.16 1.17 111.2 -1.44 -0.34 22.2 78 10 11 5 11 1 2 0  
18 1.20 1.14 115.9 -1.57 -0.44 19.5 76 8 10 7 8 3 4 0  
19 1.36 1.44 25.2 -0.66 -0.41 3.0 78 0 1 2 4 0 2 0  
20 1.17 1.47 26.8 -0.32 -0.02 15.1 90 3 2 2 2 3 0 0  
21 1.17 1.47 47.8 -0.34 -0.04 15.1 85 5 4 2 4 5 0 0  
22 1.25 1.34 125.9 -1.48 -0.43 21.5 80 8 7 7 7 1 0 2  
23 1.19 1.47 142.8 -0.60 -0.20 16.9 80 7 8 8 13 2 2 2  
24 1.28 1.42 32.8 -0.37 -0.05 14.1 87 4 2 2 4 4 0 0  
25 1.29 1.55 55.0 1.24 0.48 10.1 73 2 3 2 8 7 0 2  
26 1.23 1.53 39.0 -0.51 -0.02 15.6 85 4 2 2 3 5 0 0  
27 1.64 2.73 51.0 -2.06 -0.46 29.3 81 5 5 1 2 2 0 0  
28 1.47 2.14 64.9 -1.75 -0.52 25.9 79 8 8 3 2 1 0 1  
29 1.10 1.78 72.9 -0.92 -0.15 18.1 76 3 4 2 8 3 2 0  
30 1.19 1.52 32.2 -0.49 -0.05 15.2 90 3 2 2 3 3 0 0  
31 1.75 5.96 47.4 -1.99 -0.47 29.0 86 4 4 1 2 0 0 0  
32 1.73 1.76 25.7 -0.08 0.12 11.5 64 1 1 1 3 3 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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