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PDBsum entry 4a92

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 4a92 calculated with MOLE 2.0 PDB id
4a92
Pores calculated on whole structure Pores calculated excluding ligands

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12 pores, coloured by radius 13 pores, coloured by radius 13 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.09 2.09 26.6 -1.61 -0.41 19.5 85 4 1 2 3 2 1 0  
2 3.60 3.84 37.2 -1.57 -0.41 14.9 85 6 1 4 2 1 3 0  
3 2.20 2.50 42.5 -1.69 -0.50 22.5 90 5 4 4 3 1 1 0  
4 2.92 3.75 49.0 -1.88 -0.62 17.9 86 5 5 4 3 0 2 0  F9K 1721 B
5 2.94 3.73 50.3 -2.19 -0.59 21.1 88 8 6 4 1 1 1 0  F9K 1721 B
6 3.43 3.43 53.6 -1.50 -0.55 11.5 86 7 1 6 2 1 2 0  
7 3.44 3.44 55.3 -1.80 -0.50 15.2 89 10 2 6 0 2 1 0  
8 2.92 3.71 56.2 -2.47 -0.66 22.2 88 8 6 5 1 1 0 0  F9K 1721 B
9 2.15 2.15 57.7 -1.14 -0.44 14.8 88 7 2 4 4 1 0 0  
10 2.15 2.15 62.9 -0.91 -0.53 9.6 84 5 1 6 6 0 2 0  
11 2.15 2.15 64.2 -1.16 -0.52 11.4 87 7 2 6 4 1 1 0  
12 2.15 2.15 66.2 -1.66 -0.59 17.9 86 6 6 5 5 0 0 0  F9K 1721 B
13 1.19 1.34 153.8 -1.79 -0.54 16.3 89 10 11 13 5 3 3 0  F9K 1721 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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