 |
PDBsum entry 4a92
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 4a92 calculated with MOLE 2.0
|
PDB id
|
|
|
|
4a92
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
12 pores,
coloured by radius |
 |
13 pores,
coloured by radius
|
13 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
2.09 |
2.09 |
26.6 |
-1.61 |
-0.41 |
19.5 |
85 |
 |
4 |
1 |
2 |
3 |
2 |
1 |
0 |
 |
|
 |
 |
2 |
 |
3.60 |
3.84 |
37.2 |
-1.57 |
-0.41 |
14.9 |
85 |
6 |
1 |
4 |
2 |
1 |
3 |
0 |
|
 |
3 |
 |
2.20 |
2.50 |
42.5 |
-1.69 |
-0.50 |
22.5 |
90 |
5 |
4 |
4 |
3 |
1 |
1 |
0 |
|
 |
4 |
 |
2.92 |
3.75 |
49.0 |
-1.88 |
-0.62 |
17.9 |
86 |
5 |
5 |
4 |
3 |
0 |
2 |
0 |
F9K 1721 B
|
 |
5 |
 |
2.94 |
3.73 |
50.3 |
-2.19 |
-0.59 |
21.1 |
88 |
8 |
6 |
4 |
1 |
1 |
1 |
0 |
F9K 1721 B
|
 |
6 |
 |
3.43 |
3.43 |
53.6 |
-1.50 |
-0.55 |
11.5 |
86 |
7 |
1 |
6 |
2 |
1 |
2 |
0 |
|
 |
7 |
 |
3.44 |
3.44 |
55.3 |
-1.80 |
-0.50 |
15.2 |
89 |
10 |
2 |
6 |
0 |
2 |
1 |
0 |
|
 |
8 |
 |
2.92 |
3.71 |
56.2 |
-2.47 |
-0.66 |
22.2 |
88 |
8 |
6 |
5 |
1 |
1 |
0 |
0 |
F9K 1721 B
|
 |
9 |
 |
2.15 |
2.15 |
57.7 |
-1.14 |
-0.44 |
14.8 |
88 |
7 |
2 |
4 |
4 |
1 |
0 |
0 |
|
 |
10 |
 |
2.15 |
2.15 |
62.9 |
-0.91 |
-0.53 |
9.6 |
84 |
5 |
1 |
6 |
6 |
0 |
2 |
0 |
|
 |
11 |
 |
2.15 |
2.15 |
64.2 |
-1.16 |
-0.52 |
11.4 |
87 |
7 |
2 |
6 |
4 |
1 |
1 |
0 |
|
 |
12 |
 |
2.15 |
2.15 |
66.2 |
-1.66 |
-0.59 |
17.9 |
86 |
6 |
6 |
5 |
5 |
0 |
0 |
0 |
F9K 1721 B
|
 |
13 |
 |
1.19 |
1.34 |
153.8 |
-1.79 |
-0.54 |
16.3 |
89 |
10 |
11 |
13 |
5 |
3 |
3 |
0 |
F9K 1721 A
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |