PDBsum entry 4a5k Go to PDB code:  Tunnel analysis for: 4a5k calculated with MOLE 2.0 PDB id 4a5k Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 tunnels, coloured by tunnel radius 9 tunnels, coloured by tunnel radius 9 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.32 1.49 17.0 -1.24 -0.71 12.0 94 2 0 5 1 1 0 0   2 1.32 1.48 29.6 -1.46 -0.74 12.6 95 3 0 8 1 1 0 0   3 1.32 1.46 34.0 -1.38 -0.69 13.0 89 5 0 7 1 2 1 0   4 1.33 1.49 37.3 -1.63 -0.69 14.2 90 6 0 9 1 2 1 0   5 1.32 1.49 37.3 -1.66 -0.66 15.1 91 5 0 8 1 2 0 0   6 1.32 1.47 48.0 -2.53 -0.55 29.5 90 10 0 8 1 1 0 0   7 2.06 2.22 15.4 -0.62 -0.08 17.6 72 2 1 0 1 2 0 0   8 2.02 2.24 25.6 0.38 -0.29 6.4 83 0 1 2 4 1 0 1   9 2.02 2.11 25.6 0.45 -0.25 6.0 83 0 1 3 4 1 0 1   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.