PDBsum entry 4a3d Go to PDB code:  Pore analysis for: 4a3d calculated with MOLE 2.0 PDB id 4a3d Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.37 1.51 53.2 -0.97 0.20 19.2 70 5 3 1 3 3 2 0   2 2.10 2.67 62.4 -2.02 -0.57 28.3 81 10 5 4 4 0 1 0   3 2.35 3.54 69.5 -1.33 -0.37 15.3 85 6 7 6 8 1 3 0  DA 9 T DA 10 T 4 1.37 1.51 70.7 -1.27 -0.01 21.2 74 6 5 2 8 3 3 0   5 2.32 3.62 85.2 -2.17 -0.70 20.0 87 10 8 8 5 1 2 0  DA 9 T DA 10 T 6 2.19 2.26 94.3 -2.02 -0.43 20.8 88 13 9 20 3 3 1 0   7 1.73 3.19 101.8 -2.03 -0.42 27.1 78 15 10 3 7 3 2 0   8 1.42 1.82 101.4 -1.94 -0.35 22.7 81 13 8 8 4 6 1 0   9 2.29 3.56 109.5 -2.54 -0.66 20.0 85 9 10 9 5 1 3 0  DA 9 T DA 10 T 10 2.11 2.37 115.9 -1.42 -0.37 17.4 84 10 9 18 11 3 3 0   11 1.38 1.61 118.3 -1.47 -0.40 20.5 85 13 6 7 7 1 2 0  DA 2 N 12 2.11 2.81 116.8 -2.14 -0.62 25.1 83 12 13 8 8 1 2 0  DA 9 T DA 10 T 13 2.20 2.49 124.4 -1.43 -0.47 26.1 86 10 14 3 7 0 1 0   14 1.66 2.96 136.0 -1.99 -0.43 27.8 78 16 15 5 10 3 2 0   15 1.01 1.14 135.6 -2.14 -0.45 24.0 81 17 9 10 3 4 1 0   16 1.73 2.98 142.2 -2.15 -0.52 26.0 81 13 18 6 8 4 1 0  DA 9 T DA 10 T 17 1.62 1.83 144.2 -1.83 -0.57 23.5 83 14 12 6 4 0 3 0   18 1.30 1.50 149.7 -1.16 -0.14 20.5 79 16 8 6 13 4 6 0  DA 2 N DC 5 P DT 18 T DT 25 T DC 26 T 19 2.01 2.33 155.7 -1.59 -0.43 17.8 77 14 14 11 13 6 5 0   20 1.25 1.47 163.6 -1.30 -0.11 18.8 81 19 10 15 15 9 4 0   21 1.55 1.74 183.7 -1.67 -0.42 20.1 80 16 15 11 12 3 6 0   22 1.28 1.50 193.1 -1.28 -0.21 22.2 80 22 10 7 16 4 4 0  DA 2 N DC 5 P DT 16 T DT 17 T DT 18 T DT 25 T DC 26 T 23 2.07 2.08 199.3 -1.72 -0.49 19.5 83 16 14 20 9 6 4 0   24 1.26 1.47 201.8 -1.24 -0.17 20.0 82 20 10 10 15 5 6 0  DC 5 P DT 18 T DT 25 T DC 26 T 25 2.07 2.28 205.4 -1.92 -0.43 22.8 80 20 17 13 9 6 3 0   26 1.30 1.23 216.8 -1.52 -0.43 21.4 84 18 20 13 16 5 5 0  DA 9 T DA 10 T 27 1.32 1.46 232.7 -1.43 -0.20 22.8 78 25 15 5 19 7 5 0  DA 2 N DC 5 P DT 16 T DT 17 T DT 18 T DT 25 T DC 26 T 28 1.35 1.34 233.1 -1.46 -0.38 20.0 82 22 16 14 14 2 6 0  DA 2 N DC 5 P DT 18 T DT 25 T DC 26 T 29 1.94 2.12 233.4 -1.95 -0.41 25.1 82 22 18 11 8 3 4 0   30 1.26 1.55 276.9 -1.37 -0.20 22.6 80 26 17 11 22 7 6 0  DA 2 N DC 5 P DT 16 T DT 17 T DT 18 T DT 25 T DC 26 T Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.