PDBsum entry 4a28 Go to PDB code:  Tunnel analysis for: 4a28 calculated with MOLE 2.0 PDB id 4a28 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.22 2.86 20.1 1.83 0.53 7.8 85 1 1 2 9 0 0 0   2 1.22 2.85 20.6 0.57 0.24 15.8 85 2 3 3 9 0 0 0   3 1.23 2.86 28.1 0.96 0.20 9.4 85 2 2 3 9 0 0 0   4 1.21 2.72 18.7 -0.16 -0.11 14.1 78 1 1 0 4 2 0 0   5 1.21 2.72 20.4 -0.57 -0.20 17.3 78 1 3 2 4 2 0 0   6 1.37 1.51 16.3 -2.38 -0.35 34.2 81 3 1 0 1 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.