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PDBsum entry 4a28

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protein ligands metals Protein-protein interface(s) links
Motor protein PDB id
4a28

 

 

 

 

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Contents
Protein chains
332 a.a.
Ligands
ADP ×2
Metals
_MG ×2
Waters ×199
PDB id:
4a28
Name: Motor protein
Title: Eg5-2
Structure: Kinesin-like protein kif11. Chain: a, b. Fragment: motor domain, residues 1-368. Synonym: kinesin-like protein 1, kinesin-like spindle protein hksp, kinesin-related motor protein eg5, eg5-2, thyroid receptor- interacting protein 5, tr-interacting protein 5, trip-5. Engineered: yes. Mutation: yes
Source: Homo sapiens. Human. Organism_taxid: 9606. Expressed in: escherichia coli. Expression_system_taxid: 469008. Expression_system_variant: plyss.
Resolution:
2.55Å     R-factor:   0.184     R-free:   0.264
Authors: S.K.Talapatra,F.Kozielski
Key ref: S.K.Talapatra et al. (2013). Mitotic kinesin Eg5 overcomes inhibition to the phase I/II clinical candidate SB743921 by an allosteric resistance mechanism. J Med Chem, 56, 6317-6329. PubMed id: 23875972 DOI: 10.1021/jm4006274
Date:
22-Sep-11     Release date:   31-Oct-12    
PROCHECK
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 Headers
 References

Protein chains
Pfam   ArchSchema ?
P52732  (KIF11_HUMAN) -  Kinesin-like protein KIF11 from Homo sapiens
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
1056 a.a.
332 a.a.*
Key:    PfamA domain  Secondary structure  CATH domain
* PDB and UniProt seqs differ at 1 residue position (black cross)

 

 
DOI no: 10.1021/jm4006274 J Med Chem 56:6317-6329 (2013)
PubMed id: 23875972  
 
 
Mitotic kinesin Eg5 overcomes inhibition to the phase I/II clinical candidate SB743921 by an allosteric resistance mechanism.
S.K.Talapatra, N.G.Anthony, S.P.Mackay, F.Kozielski.
 
  ABSTRACT  
 
Development of drug resistance during cancer chemotherapy is one of the major causes of chemotherapeutic failure for the majority of clinical agents. The aim of this study was to investigate the underlying molecular mechanism of resistance developed by the mitotic kinesin Eg5 against the potent second-generation ispinesib analogue SB743921 (1), a phase I/II clinical candidate. Biochemical and biophysical data demonstrate that point mutations in the inhibitor-binding pocket decrease the efficacy of 1 by several 1000-fold. Surprisingly, the structures of wild-type and mutant Eg5 in complex with 1 display no apparent structural changes in the binding configuration of the drug candidate. Furthermore, ITC and modeling approaches reveal that resistance to 1 is not through conventional steric effects at the binding site but through reduced flexibility and changes in energy fluctuation pathways through the protein that influence its function. This is a phenomenon we have called "resistance by allostery".
 

 

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