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PDBsum entry 4a0b
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Tunnel analysis for: 4a0b calculated with  MOLE 2.0
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PDB id
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4a0b
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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12 tunnels,
coloured by tunnel radius |
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9 tunnels,
coloured by
tunnel radius
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9 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.18 |
1.37 |
110.1 |
-1.09 |
-0.12 |
21.6 |
79 |
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15 |
8 |
4 |
12 |
7 |
3 |
1 |
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2 |
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1.23 |
3.05 |
16.6 |
0.49 |
-0.13 |
8.0 |
84 |
0 |
2 |
0 |
3 |
1 |
0 |
1 |
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3 |
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1.20 |
1.21 |
18.3 |
0.29 |
-0.08 |
11.2 |
80 |
1 |
2 |
1 |
3 |
1 |
0 |
1 |
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4 |
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1.24 |
3.04 |
20.2 |
0.20 |
-0.22 |
11.3 |
82 |
0 |
2 |
0 |
2 |
1 |
0 |
1 |
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5 |
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1.22 |
3.02 |
16.6 |
0.49 |
-0.13 |
8.0 |
84 |
0 |
2 |
0 |
3 |
1 |
0 |
1 |
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6 |
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1.39 |
1.39 |
19.4 |
2.56 |
0.75 |
5.3 |
77 |
0 |
1 |
1 |
9 |
1 |
0 |
0 |
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7 |
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1.23 |
3.03 |
20.3 |
0.35 |
-0.17 |
10.5 |
82 |
0 |
2 |
0 |
2 |
1 |
0 |
1 |
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8 |
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1.21 |
1.21 |
18.9 |
-1.38 |
-0.37 |
17.2 |
67 |
3 |
0 |
0 |
0 |
2 |
0 |
0 |
DC 13 G DA 14 G DC 7 H DC 8 H DA 9 H
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9 |
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1.24 |
2.56 |
16.5 |
2.95 |
1.17 |
0.7 |
65 |
0 |
0 |
0 |
7 |
2 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program