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PDBsum entry 3zyj
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Tunnel analysis for: 3zyj calculated with  MOLE 2.0
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PDB id
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3zyj
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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19 tunnels,
coloured by tunnel radius |
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19 tunnels,
coloured by
tunnel radius
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19 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.22 |
1.29 |
32.6 |
-1.81 |
-0.56 |
23.2 |
89 |
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4 |
3 |
2 |
1 |
1 |
0 |
0 |
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2 |
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1.20 |
1.30 |
33.2 |
-1.76 |
-0.57 |
22.0 |
86 |
4 |
3 |
2 |
0 |
2 |
0 |
0 |
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3 |
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1.20 |
1.30 |
34.7 |
-1.61 |
-0.48 |
21.7 |
88 |
4 |
3 |
2 |
2 |
1 |
1 |
0 |
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4 |
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1.20 |
1.29 |
35.6 |
-0.87 |
-0.48 |
13.3 |
86 |
2 |
3 |
2 |
4 |
2 |
0 |
0 |
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5 |
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1.17 |
1.30 |
36.2 |
-0.87 |
-0.48 |
13.2 |
83 |
2 |
3 |
2 |
3 |
3 |
0 |
0 |
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6 |
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1.19 |
1.29 |
37.7 |
-0.76 |
-0.41 |
13.2 |
85 |
2 |
3 |
2 |
5 |
2 |
1 |
0 |
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7 |
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1.18 |
1.29 |
38.7 |
-1.32 |
-0.43 |
16.4 |
77 |
3 |
4 |
1 |
4 |
3 |
1 |
0 |
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8 |
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1.19 |
1.28 |
39.3 |
-1.37 |
-0.44 |
17.2 |
74 |
3 |
4 |
1 |
3 |
4 |
1 |
0 |
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9 |
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1.18 |
1.30 |
40.8 |
-1.15 |
-0.38 |
15.5 |
77 |
3 |
4 |
1 |
5 |
3 |
2 |
0 |
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10 |
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1.20 |
1.29 |
49.3 |
-0.23 |
-0.30 |
6.7 |
87 |
2 |
2 |
4 |
5 |
4 |
0 |
0 |
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11 |
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1.21 |
1.31 |
49.9 |
-0.19 |
-0.31 |
6.5 |
85 |
2 |
2 |
4 |
4 |
5 |
0 |
0 |
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12 |
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1.22 |
1.31 |
51.4 |
-0.12 |
-0.25 |
6.2 |
86 |
2 |
2 |
4 |
6 |
4 |
1 |
0 |
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13 |
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1.33 |
1.44 |
33.8 |
-1.80 |
-0.29 |
22.1 |
71 |
3 |
3 |
1 |
3 |
4 |
1 |
0 |
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14 |
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1.33 |
1.44 |
37.5 |
-0.83 |
-0.26 |
13.4 |
82 |
4 |
3 |
3 |
4 |
4 |
0 |
0 |
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15 |
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1.32 |
1.43 |
45.2 |
-0.97 |
-0.21 |
16.0 |
84 |
5 |
3 |
2 |
3 |
4 |
0 |
0 |
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16 |
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1.33 |
1.42 |
60.9 |
-0.75 |
-0.12 |
16.4 |
80 |
7 |
5 |
4 |
8 |
6 |
0 |
0 |
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17 |
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1.18 |
1.78 |
20.2 |
1.55 |
0.40 |
5.1 |
81 |
1 |
1 |
2 |
5 |
1 |
1 |
0 |
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18 |
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1.17 |
1.78 |
25.0 |
1.35 |
0.42 |
7.2 |
82 |
1 |
1 |
1 |
5 |
1 |
1 |
0 |
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19 |
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1.08 |
2.49 |
17.0 |
2.07 |
0.39 |
3.9 |
75 |
1 |
1 |
0 |
5 |
1 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program