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PDBsum entry 3zuv

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Pore analysis for: 3zuv calculated with MOLE 2.0 PDB id
3zuv
Pores calculated on whole structure Pores calculated excluding ligands

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19 pores, coloured by radius 18 pores, coloured by radius 18 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.58 4.79 25.1 -1.87 -0.23 18.6 84 4 2 1 2 1 0 0  
2 1.58 3.56 37.5 -2.01 -0.49 20.7 85 3 4 4 6 1 2 0  
3 2.81 4.01 48.3 -1.57 -0.07 21.1 76 9 3 2 3 4 2 0  
4 2.70 3.18 50.1 -2.00 -0.30 20.6 78 9 3 3 3 2 2 0  TPO 183 A PTR 185 A
5 1.40 3.08 53.4 -1.26 -0.32 15.2 88 5 3 5 4 2 0 0  PTR 185 A
6 1.39 1.52 57.5 -1.23 -0.45 14.7 88 5 3 5 3 2 0 0  TPO 183 A PTR 185 A
7 1.38 3.05 73.5 -1.58 -0.17 21.1 81 10 4 5 6 3 2 0  PTR 185 A
8 1.68 1.71 80.7 -2.09 -0.35 24.1 78 8 6 4 6 6 3 0  SO4 1359 A
9 1.69 1.91 81.2 -1.98 -0.43 28.0 77 8 8 4 6 4 0 0  
10 1.73 1.70 90.8 -1.71 -0.30 20.0 82 7 6 5 5 5 1 0  SO4 1359 A
11 1.64 1.86 95.7 -1.61 -0.38 24.0 79 8 8 5 5 3 0 0  
12 1.73 1.90 101.6 -1.82 -0.43 25.5 76 12 8 4 9 5 0 0  TPO 183 C PTR 185 C
13 1.65 1.86 116.1 -1.61 -0.39 23.3 77 12 8 5 8 5 0 0  TPO 183 C PTR 185 C
14 1.49 1.74 120.0 -1.48 -0.35 21.9 77 4 9 5 9 5 1 0  SO4 1359 A
15 1.45 3.09 124.8 -1.58 -0.41 23.8 83 10 10 8 9 3 0 0  PTR 185 A
16 1.40 3.06 125.8 -1.58 -0.34 20.4 85 9 8 9 10 5 1 0  PTR 185 A SO4 1359 A
17 1.22 1.37 134.6 -1.20 -0.23 22.0 80 11 11 7 10 5 0 0  
18 1.19 2.30 156.0 -1.40 -0.27 25.0 76 12 12 5 9 2 6 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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