 |
PDBsum entry 3zos
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 3zos calculated with MOLE 2.0
|
PDB id
|
|
|
|
3zos
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
2 pores,
coloured by radius |
 |
7 pores,
coloured by radius
|
7 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.75 |
1.89 |
44.6 |
0.25 |
0.25 |
18.0 |
82 |
 |
4 |
3 |
1 |
11 |
2 |
0 |
0 |
 |
0LI 1000 A 0LI 1004 A
|
 |
 |
2 |
 |
1.29 |
1.29 |
55.1 |
-0.74 |
-0.20 |
13.7 |
82 |
5 |
5 |
3 |
7 |
4 |
0 |
0 |
0LI 1000 B
|
 |
3 |
 |
1.15 |
1.44 |
55.2 |
-0.18 |
-0.01 |
15.6 |
82 |
3 |
5 |
4 |
10 |
4 |
0 |
0 |
0LI 1000 A EDO 1002 A
|
 |
4 |
 |
1.29 |
1.29 |
58.5 |
0.45 |
0.15 |
11.4 |
80 |
5 |
3 |
0 |
11 |
3 |
0 |
0 |
0LI 1004 A 0LI 1000 B
|
 |
5 |
 |
1.29 |
1.30 |
86.7 |
-0.22 |
-0.03 |
17.6 |
79 |
5 |
6 |
2 |
15 |
3 |
1 |
0 |
0LI 1000 B
|
 |
6 |
 |
1.77 |
1.94 |
119.9 |
-0.14 |
0.05 |
16.5 |
78 |
8 |
6 |
2 |
18 |
4 |
1 |
0 |
0LI 1004 A 0LI 1000 B
|
 |
7 |
 |
1.57 |
2.71 |
120.1 |
-0.89 |
-0.17 |
17.6 |
80 |
9 |
8 |
5 |
14 |
5 |
1 |
0 |
0LI 1000 B
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |