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PDBsum entry 3ze1

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 3ze1 calculated with MOLE 2.0 PDB id
3ze1
Pores calculated on whole structure Pores calculated excluding ligands

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16 pores, coloured by radius 14 pores, coloured by radius 14 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.67 3.52 47.9 -1.34 -0.19 13.7 77 4 2 5 3 3 1 0  
2 1.91 3.10 49.8 -1.13 -0.21 11.6 81 2 2 5 2 3 0 0  
3 2.06 2.06 52.5 -1.15 -0.32 17.3 83 4 2 2 4 0 1 0  
4 1.66 3.33 57.8 -1.32 -0.15 16.4 75 6 4 5 4 5 0 0  
5 2.45 4.92 83.3 -1.45 -0.43 21.3 82 6 3 3 4 0 0 0  
6 1.81 2.00 91.0 -1.69 -0.40 19.0 84 9 3 8 3 3 1 0  
7 2.13 2.45 90.3 -1.71 -0.38 24.3 83 10 6 7 6 0 1 0  
8 1.80 1.99 95.3 -1.50 -0.48 17.3 88 8 3 7 4 0 1 0  
9 1.12 1.48 106.8 -1.21 -0.32 15.3 87 5 3 9 11 3 3 0  
10 1.84 1.89 136.0 -1.46 -0.15 14.8 80 14 7 13 6 7 3 0  NAG 1 G NAG 2 G BMA 3 G
11 1.83 1.87 138.5 -1.67 -0.23 16.5 80 13 9 8 8 5 4 0  NAG 1 G NAG 2 G BMA 3 G
12 1.85 3.10 143.4 -1.41 -0.15 15.8 80 10 6 14 6 7 2 0  NAG 1 G NAG 2 G BMA 3 G
13 1.70 3.16 145.9 -1.66 -0.25 18.0 80 9 8 9 8 5 3 0  NAG 1 G NAG 2 G BMA 3 G
14 1.20 1.21 206.7 -1.41 -0.35 18.3 85 12 8 14 13 4 3 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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