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PDBsum entry 3zd7
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Pore analysis for: 3zd7 calculated with  MOLE 2.0
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PDB id
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3zd7
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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7 pores,
coloured by radius |
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5 pores,
coloured by radius
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5 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.15 |
1.32 |
29.4 |
-0.95 |
-0.48 |
10.3 |
85 |
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2 |
1 |
3 |
2 |
1 |
1 |
0 |
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2 |
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1.15 |
1.31 |
36.2 |
-0.68 |
-0.37 |
8.5 |
91 |
1 |
2 |
4 |
2 |
1 |
1 |
0 |
DC 6 C DG 7 C DG 5 D DC 6 D DG 7 D DC 8 D
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3 |
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2.80 |
3.75 |
42.1 |
-1.69 |
-0.52 |
21.2 |
82 |
5 |
3 |
5 |
1 |
0 |
0 |
1 |
DG 3 C DC 4 C DG 5 C DG 1 D DC 2 D DG 5 D DC 6 D
DG 7 D DC 8 D
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4 |
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2.72 |
2.70 |
85.6 |
-1.75 |
-0.62 |
18.9 |
82 |
9 |
4 |
7 |
1 |
0 |
1 |
1 |
DG 3 C DC 4 C DG 5 C DG 7 C DC 8 C DC 10 C DG 1 D
DC 2 D
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5 |
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1.28 |
1.54 |
30.0 |
0.18 |
0.21 |
17.7 |
78 |
3 |
3 |
1 |
2 |
2 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program