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PDBsum entry 3zbf

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protein ligands links
Transferase PDB id
3zbf

 

 

 

 

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JSmol PyMol  
Contents
Protein chain
282 a.a.
Ligands
VGH
Waters ×137
PDB id:
3zbf
Name: Transferase
Title: Structure of human ros1 kinase domain in complex with crizotinib
Structure: Proto-oncogene tyrosine-protein kinase ros. Chain: a. Fragment: kinase domain, residues 1934-2232. Synonym: proto-oncogenE C-ros, proto-oncogenE C-ros-1, receptor tyrosine kinasE C-ros oncogene 1, c-ros receptor tyrosine kinase. Engineered: yes
Source: Homo sapiens. Human. Organism_taxid: 9606. Expressed in: spodoptera frugiperda. Expression_system_taxid: 7108. Expression_system_cell_line: sf21.
Resolution:
2.20Å     R-factor:   0.236     R-free:   0.282
Authors: M.Mctigue,Y.Deng,W.Liu,A.Brooun,A.Stewart
Key ref: M.M.Awad et al. (2013). Acquired resistance to crizotinib from a mutation in CD74-ROS1. N Engl J Med, 368, 2395-2401. PubMed id: 23724914 DOI: 10.1056/NEJMoa1215530
Date:
08-Nov-12     Release date:   12-Jun-13    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chain
Pfam   ArchSchema ?
P08922  (ROS1_HUMAN) -  Proto-oncogene tyrosine-protein kinase ROS from Homo sapiens
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
2347 a.a.
282 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Enzyme reactions 
   Enzyme class: E.C.2.7.10.1  - receptor protein-tyrosine kinase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H+
L-tyrosyl-[protein]
+ ATP
= O-phospho-L-tyrosyl-[protein]
+ ADP
+ H(+)
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

 
    Added reference    
 
 
DOI no: 10.1056/NEJMoa1215530 N Engl J Med 368:2395-2401 (2013)
PubMed id: 23724914  
 
 
Acquired resistance to crizotinib from a mutation in CD74-ROS1.
M.M.Awad, R.Katayama, M.McTigue, W.Liu, Y.L.Deng, A.Brooun, L.Friboulet, D.Huang, M.D.Falk, S.Timofeevski, K.D.Wilner, E.L.Lockerman, T.M.Khan, S.Mahmood, J.F.Gainor, S.R.Digumarthy, J.R.Stone, M.Mino-Kenudson, J.G.Christensen, A.J.Iafrate, J.A.Engelman, A.T.Shaw.
 
  ABSTRACT  
 
Crizotinib, an inhibitor of anaplastic lymphoma kinase (ALK), has also recently shown efficacy in the treatment of lung cancers with ROS1 translocations. Resistance to crizotinib developed in a patient with metastatic lung adenocarcinoma harboring a CD74-ROS1 rearrangement who had initially shown a dramatic response to treatment. We performed a biopsy of a resistant tumor and identified an acquired mutation leading to a glycine-to-arginine substitution at codon 2032 in the ROS1 kinase domain. Although this mutation does not lie at the gatekeeper residue, it confers resistance to ROS1 kinase inhibition through steric interference with drug binding. The same resistance mutation was observed at all the metastatic sites that were examined at autopsy, suggesting that this mutation was an early event in the clonal evolution of resistance. (Funded by Pfizer and others; ClinicalTrials.gov number, NCT00585195 .).
 

 

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