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Ligand clusters for UniProt code P12851

Ligand clusters for P12851: Xylose isomerase OS=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) GN=xylA PE=1 SV=3

2 ligand clusters
Cluster 1.
6 ligand types
28 ligands
Cluster 2.
3 ligand types
7 ligands
Representative protein: 1ximA  
 

Structures

PDB   Schematic diagram
1ximA    
9ximA    
5xinA    
2ximA    
6ximA    
 more ...

 

 Cluster 1 contains 6 ligand types

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Ligand Description


 
1. Ligand: SOR × 3
D-Sorbitol
PDB codes: 2xin(A), 3xim(A), 5xim(A).


 
2. Ligand: XYL × 3
D-Xylitol
PDB codes: 1xim(A), 1xin(A), 2xim(A).


 
3. Ligand: XLS × 4
D-Xylose (linear form)
PDB codes: 5xin(A), 6xim(A), 8xim(A), 9xim(A).

_Co
 
4. Metal: _CO × 8
PDB codes: 1xim(A), 2xin(A), 3xim(A), 4xim(A),

_Mg
 
5. Metal: _MG × 8
PDB codes: 1xin(A), 2xim(A), 5xim(A), 5xin(A), 6xim(A), 8xim(A).

_Mn
 
6. Metal: _MN × 2
PDB codes: 9xim(A),

 

 Cluster 2 contains 3 ligand types

Selection shortcuts: select all/none invert selection.
Ligand Description


 
1. Ligand: SOR × 2
D-Sorbitol
PDB codes: 3xim(A), 5xim(A).


 
2. Ligand: XYL × 2
D-Xylitol
PDB codes: 1xin(A), 2xim(A).


 
3. Ligand: XLS × 3
D-Xylose (linear form)
PDB codes: 6xim(A), 8xim(A), 9xim(A).

 

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