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PDBsum entry 3wt4

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 3wt4 calculated with MOLE 2.0 PDB id
3wt4
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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7 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.35 2.10 20.1 -2.95 -0.75 32.6 83 5 3 1 0 0 0 0  
2 1.42 2.10 16.0 0.41 -0.09 5.7 79 2 0 0 2 1 0 0  
3 1.41 1.96 24.6 -0.56 -0.15 15.6 83 6 0 0 2 1 0 0  
4 1.14 1.27 16.8 2.20 0.69 3.2 73 1 1 0 6 3 0 0  
5 1.32 3.19 17.4 2.12 0.81 9.4 75 2 2 0 7 2 0 0  
6 1.28 2.97 23.3 1.50 0.45 12.1 73 0 2 0 8 2 0 0  
7 1.13 1.45 22.0 -1.32 -0.50 19.5 90 3 2 2 2 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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