PDBsum entry 3wrd Go to PDB code:  Tunnel analysis for: 3wrd calculated with MOLE 2.0 PDB id 3wrd Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.06 3.82 15.2 -2.47 -0.18 34.0 83 4 2 1 1 1 0 0   2 2.06 3.82 16.3 -2.44 -0.18 34.1 83 4 2 1 1 1 0 0   3 2.10 3.82 18.2 -2.14 -0.17 19.2 88 3 1 3 1 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.