PDBsum entry 3wph Go to PDB code:  Tunnel analysis for: 3wph calculated with MOLE 2.0 PDB id 3wph Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.10 1.10 33.0 -2.40 -0.60 23.6 88 3 3 5 2 1 0 0  DC 2 B DT 3 B DG 4 B DG 5 B DG 8 B 2 1.14 1.14 38.4 -1.81 -0.46 24.9 84 5 5 4 1 2 0 0  DC 2 B DT 3 B DG 4 B DG 8 B 3 1.13 1.13 22.3 -1.92 -0.23 21.8 86 2 1 3 1 2 0 0  DG 8 B DG 9 B DG 10 B Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.