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PDBsum entry 3wpb

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Tunnel analysis for: 3wpb calculated with MOLE 2.0 PDB id
3wpb
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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2 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.15 2.30 15.4 -2.33 -0.47 29.3 75 3 1 1 1 3 0 0  SO4 906 A
2 2.00 2.84 15.5 -1.26 0.19 22.3 75 3 1 0 1 2 0 0  
3 1.24 1.51 18.3 1.56 0.49 1.2 64 0 0 2 7 2 1 0  
4 1.21 1.56 18.1 1.59 0.54 4.1 83 1 1 1 6 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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