PDBsum entry 3wod Go to PDB code:  Pore analysis for: 3wod calculated with MOLE 2.0 PDB id 3wod Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   13 pores, coloured by radius 13 pores, coloured by radius 13 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.49 1.49 26.1 -2.15 -0.46 18.1 75 4 5 3 0 2 4 0   2 1.13 1.37 31.4 0.17 0.20 15.3 77 4 2 0 8 1 0 0   3 2.82 2.79 70.4 -2.67 -0.59 34.4 81 8 10 4 4 2 0 0   4 1.77 2.17 126.7 -1.54 -0.34 26.0 79 14 14 1 8 4 1 0   5 1.90 1.92 137.7 -2.40 -0.38 28.5 80 13 10 8 5 4 2 0   6 1.74 1.83 141.4 -2.37 -0.57 27.5 81 15 13 7 6 3 3 0   7 2.77 4.89 153.1 -2.82 -0.41 33.0 78 15 10 3 5 3 3 0   8 2.52 2.72 170.9 -2.42 -0.48 30.8 82 21 15 8 6 3 5 0   9 2.49 2.62 176.5 -2.51 -0.50 29.6 81 20 17 8 7 4 4 0   10 1.26 1.26 305.3 -1.62 -0.39 23.1 80 22 31 11 19 7 3 0   11 1.26 1.28 368.6 -1.30 -0.24 21.5 80 31 20 14 28 11 5 0   12 1.35 1.43 28.7 -0.35 0.10 11.7 69 1 3 0 5 2 1 0   13 1.35 1.44 36.4 0.36 0.12 6.6 70 0 2 0 8 3 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.