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PDBsum entry 3wo3
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Pore analysis for: 3wo3 calculated with  MOLE 2.0
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PDB id
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3wo3
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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18 pores,
coloured by radius |
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31 pores,
coloured by radius
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31 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.08 |
2.29 |
28.0 |
-1.69 |
-0.37 |
21.0 |
88 |
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5 |
2 |
3 |
2 |
0 |
0 |
0 |
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SO4 201 C
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2 |
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1.44 |
1.46 |
30.3 |
-2.00 |
-0.56 |
25.5 |
88 |
3 |
3 |
4 |
1 |
2 |
0 |
0 |
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3 |
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1.97 |
3.21 |
49.5 |
-1.81 |
-0.39 |
23.0 |
82 |
5 |
3 |
3 |
2 |
1 |
0 |
0 |
SO4 201 E SO4 202 E NAG 2 U BMA 3 U NAG 1 X NAG 2
X BMA 3 X
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4 |
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1.97 |
3.22 |
61.7 |
-0.74 |
-0.16 |
14.5 |
83 |
3 |
3 |
5 |
5 |
2 |
1 |
0 |
SO4 201 E SO4 202 E NAG 1 U NAG 2 U BMA 3 U NAG 2
X BMA 3 X
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5 |
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1.49 |
1.48 |
66.1 |
-1.92 |
-0.56 |
25.7 |
87 |
7 |
7 |
3 |
2 |
1 |
0 |
0 |
SO4 202 E NAG 2 U BMA 3 U NAG 1 X NAG 2 X BMA 3 X
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6 |
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2.19 |
2.56 |
68.2 |
-1.45 |
-0.37 |
20.8 |
85 |
4 |
5 |
5 |
4 |
2 |
0 |
0 |
SO4 201 A NAG 2 O NAG 1 c NAG 2 c BMA 3 c
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7 |
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1.31 |
2.44 |
68.7 |
-2.10 |
-0.47 |
23.8 |
82 |
9 |
7 |
3 |
5 |
1 |
0 |
0 |
SO4 203 E SO4 823 F NAG 2 T BMA 3 T NAG 1 Y NAG 2
Y BMA 3 Y MAN 4 Y
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8 |
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1.41 |
1.84 |
70.5 |
-1.90 |
-0.57 |
23.3 |
83 |
6 |
6 |
5 |
3 |
4 |
0 |
0 |
BMA 3 P
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9 |
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1.36 |
2.42 |
83.2 |
-2.38 |
-0.68 |
25.5 |
83 |
9 |
9 |
6 |
2 |
1 |
0 |
0 |
SO4 201 E SO4 203 E SO4 823 F NAG 2 U BMA 3 U
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10 |
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1.36 |
2.45 |
84.4 |
-2.04 |
-0.68 |
22.6 |
80 |
9 |
10 |
5 |
4 |
1 |
1 |
0 |
SO4 203 E SO4 823 F SO4 824 F SO4 202 G NAG 2 P
BMA 3 P NAG 2 T BMA 3 T NAG 2 b
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11 |
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1.28 |
2.39 |
85.2 |
-1.71 |
-0.44 |
20.7 |
81 |
8 |
7 |
4 |
3 |
2 |
1 |
0 |
SO4 203 E SO4 823 F NAG 1 U NAG 2 U BMA 3 U NAG 2
X
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12 |
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1.29 |
2.40 |
86.1 |
-2.63 |
-0.73 |
29.0 |
83 |
9 |
9 |
4 |
1 |
0 |
0 |
0 |
SO4 202 E SO4 203 E SO4 823 F NAG 2 U BMA 3 U NAG
1 X NAG 2 X BMA 3 X
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13 |
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2.23 |
2.61 |
102.0 |
-2.71 |
-0.70 |
30.3 |
81 |
13 |
11 |
6 |
1 |
2 |
0 |
0 |
SO4 201 A BMA 3 Y MAN 4 Y BMA 3 c
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14 |
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1.91 |
3.23 |
107.6 |
-2.67 |
-0.58 |
32.5 |
80 |
15 |
10 |
5 |
3 |
2 |
0 |
0 |
SO4 201 E NAG 2 U BMA 3 U BMA 3 Y MAN 4 Y
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15 |
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1.41 |
1.41 |
111.5 |
-1.74 |
-0.52 |
22.5 |
82 |
11 |
6 |
5 |
6 |
4 |
1 |
0 |
SO4 202 G BMA 3 P NAG 2 T BMA 3 T NAG 1 b NAG 2 b
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16 |
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1.29 |
1.69 |
118.9 |
-2.24 |
-0.55 |
28.3 |
80 |
15 |
10 |
6 |
4 |
6 |
0 |
0 |
SO4 824 F NAG 2 P BMA 3 P NAG 1 Y NAG 2 Y
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17 |
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1.38 |
2.41 |
117.6 |
-2.01 |
-0.51 |
26.6 |
81 |
14 |
15 |
4 |
5 |
1 |
0 |
0 |
SO4 203 E SO4 823 F NAG 2 O NAG 2 P NAG 1 c NAG 2
c BMA 3 c
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18 |
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2.14 |
3.22 |
126.2 |
-2.06 |
-0.34 |
28.7 |
80 |
14 |
10 |
5 |
6 |
3 |
0 |
0 |
SO4 201 E NAG 2 O NAG 2 U BMA 3 U NAG 1 c NAG 2 c
BMA 3 c
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19 |
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1.24 |
2.33 |
130.5 |
-2.56 |
-0.63 |
28.5 |
80 |
17 |
17 |
7 |
2 |
3 |
0 |
0 |
SO4 201 A SO4 203 E SO4 823 F NAG 2 P BMA 3 c
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20 |
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2.24 |
2.61 |
137.1 |
-2.25 |
-0.45 |
27.3 |
80 |
13 |
11 |
7 |
5 |
4 |
1 |
0 |
SO4 201 A NAG 1 U NAG 2 U BMA 3 U NAG 2 X BMA 3 c
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21 |
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1.91 |
3.19 |
141.6 |
-2.36 |
-0.52 |
29.3 |
79 |
17 |
13 |
7 |
7 |
3 |
1 |
0 |
SO4 201 E SO4 824 F SO4 202 G NAG 2 P BMA 3 P NAG
2 T BMA 3 T NAG 2 U BMA 3 U NAG 2 b
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22 |
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2.27 |
2.65 |
146.3 |
-2.17 |
-0.49 |
25.5 |
82 |
13 |
8 |
7 |
9 |
3 |
1 |
0 |
SO4 201 A SO4 202 A NAG 902 B NAG 1 O NAG 2 O BMA
3 c
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23 |
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1.97 |
2.28 |
152.5 |
-2.86 |
-0.60 |
33.1 |
80 |
18 |
15 |
7 |
2 |
3 |
0 |
0 |
SO4 201 A SO4 202 E NAG 2 U BMA 3 U NAG 1 X NAG 2
X BMA 3 X BMA 3 c
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24 |
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2.25 |
2.63 |
148.0 |
-2.32 |
-0.56 |
28.0 |
80 |
17 |
15 |
8 |
7 |
3 |
1 |
0 |
SO4 201 A SO4 824 F SO4 202 G NAG 2 P BMA 3 P NAG
2 T BMA 3 T NAG 2 b BMA 3 c
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25 |
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1.20 |
2.33 |
173.6 |
-2.28 |
-0.57 |
25.9 |
80 |
21 |
15 |
7 |
5 |
2 |
1 |
0 |
SO4 203 C NAG 902 D SO4 203 E SO4 823 F NAG 1 P N
AG 2 P
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26 |
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1.42 |
2.28 |
196.8 |
-2.28 |
-0.54 |
27.6 |
81 |
23 |
18 |
7 |
11 |
2 |
1 |
0 |
SO4 202 A NAG 902 B SO4 203 E SO4 823 F NAG 1 O N
AG 2 O NAG 2 P BMA 3 c
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27 |
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1.96 |
3.17 |
208.7 |
-2.46 |
-0.53 |
30.1 |
81 |
23 |
16 |
9 |
11 |
3 |
1 |
0 |
SO4 202 A NAG 902 B SO4 201 E NAG 1 O NAG 2 O NAG
2 U BMA 3 U BMA 3 c
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28 |
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1.44 |
1.44 |
27.4 |
-1.49 |
-0.36 |
19.3 |
86 |
3 |
2 |
3 |
2 |
3 |
0 |
0 |
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29 |
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1.59 |
1.86 |
32.7 |
-1.77 |
-0.60 |
21.4 |
85 |
3 |
3 |
4 |
1 |
2 |
0 |
0 |
NAG 1 e NAG 2 e
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30 |
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2.20 |
2.52 |
44.8 |
-1.58 |
-0.65 |
17.8 |
86 |
3 |
4 |
4 |
2 |
2 |
0 |
0 |
SO4 201 K SO4 412 L
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31 |
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1.76 |
2.05 |
67.5 |
-2.08 |
-0.49 |
29.0 |
82 |
11 |
7 |
3 |
3 |
1 |
0 |
0 |
SO4 201 I
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program