spacer
spacer

PDBsum entry 3wiv

Go to PDB code: 
Top Page protein metals Protein-protein interface(s) pores links
Pore analysis for: 3wiv calculated with MOLE 2.0 PDB id
3wiv
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
3 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.54 2.93 28.4 -1.34 -0.43 12.1 75 1 2 2 5 2 2 0  
2 1.70 3.31 44.2 -1.46 -0.41 18.1 84 5 3 4 4 1 3 0  
3 1.74 3.03 53.2 -1.83 -0.41 23.8 85 8 6 7 5 2 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer