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PDBsum entry 3whk
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Pore analysis for: 3whk calculated with  MOLE 2.0
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PDB id
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3whk
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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15 pores,
coloured by radius |
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9 pores,
coloured by radius
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9 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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3.05 |
3.17 |
35.4 |
-2.46 |
-0.80 |
22.3 |
85 |
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3 |
4 |
3 |
0 |
0 |
1 |
0 |
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2 |
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1.48 |
1.48 |
35.6 |
-0.57 |
-0.19 |
13.0 |
69 |
1 |
3 |
2 |
5 |
2 |
4 |
0 |
ATP 600 C
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3 |
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1.50 |
2.00 |
59.0 |
-0.66 |
-0.13 |
16.4 |
74 |
4 |
6 |
1 |
7 |
2 |
4 |
0 |
ATP 600 F
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4 |
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2.38 |
3.94 |
61.3 |
-1.78 |
-0.24 |
25.6 |
69 |
3 |
6 |
2 |
2 |
3 |
4 |
0 |
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5 |
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1.50 |
1.99 |
67.3 |
-1.61 |
-0.46 |
21.8 |
79 |
7 |
6 |
3 |
5 |
0 |
3 |
0 |
ATP 600 F
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6 |
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1.68 |
3.71 |
93.0 |
-1.71 |
-0.38 |
27.6 |
87 |
7 |
8 |
1 |
8 |
0 |
1 |
0 |
ATP 600 C
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7 |
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1.65 |
3.76 |
93.3 |
-2.66 |
-0.56 |
30.2 |
85 |
8 |
8 |
4 |
4 |
0 |
2 |
0 |
ATP 600 C
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8 |
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1.51 |
1.51 |
93.4 |
-0.28 |
-0.16 |
11.4 |
73 |
4 |
6 |
3 |
12 |
2 |
8 |
0 |
ATP 600 A ATP 600 B
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9 |
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1.51 |
1.51 |
95.9 |
-1.03 |
-0.35 |
16.0 |
73 |
4 |
10 |
4 |
7 |
2 |
7 |
0 |
ATP 600 F
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program