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PDBsum entry 3wfs

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Top Page protein dna_rna ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 3wfs calculated with MOLE 2.0 PDB id
3wfs
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.52 1.52 19.4 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  A 9 B A 23 B G 24 B A 26 B C 27 B G 43 B G 44 B U
45 B
2 1.49 1.49 21.5 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  A 9 B A 23 B G 24 B C 25 B U 39 B C 40 B C 41 B A
42 B G 43 B G 44 B
3 1.49 1.49 30.5 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  A 9 B A 23 B G 24 B C 25 B A 26 B C 27 B U 28 B G
29 B G 30 B A 37 B A 38 B C 40 B C 41 B A 42 B G
43 B G 44 B
4 1.28 1.45 20.2 -0.97 -0.46 10.4 73 0 4 2 1 1 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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