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PDBsum entry 3wd5

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Top Page protein Protein-protein interface(s) clefts links
Cleft analysis for: 3wd5 PDB id
3wd5
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 7431.75 1.76 70.44 1 14.78 1 17.75 1 9 10 36 25 10 20 0  
2 4212.00 0.00 68.04 3 12.44 3 12.99 2 9 8 20 12 10 13 1  
3 2842.17 0.00 62.63 7 9.79 4 12.65 3 4 4 13 11 4 8 0  
4 1795.08 0.00 67.74 4 12.52 2 12.29 4 4 6 5 10 4 4 0  
5 1252.97 0.00 70.10 2 7.66 6 10.62 5 1 3 18 6 2 3 0  
6 1361.81 0.00 61.44 8 7.27 7 6.74 9 3 4 7 9 1 3 0  
7 694.83 0.00 65.28 5 8.80 5 8.23 6 1 2 6 2 2 3 0  
8 607.50 0.00 62.79 6 6.99 8 7.86 8 4 2 5 4 2 1 0  
9 425.25 0.00 60.43 9 5.38 9 7.89 7 3 1 0 3 0 3 0  
10 526.50 0.00 57.38 10 4.36 10 5.98 10 0 0 7 5 1 2 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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