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Ligand clusters for UniProt code Q8L7J2

Ligand clusters for Q8L7J2: Beta-glucosidase 6 OS=Oryza sativa subsp. japonica GN=BGLU6 PE=1 SV=1

Top 6 (of 10) ligand clusters
Cluster 1.
5 ligand types
8 ligands
Cluster 2.
1 ligand type
4 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
3 ligands
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 3gnoA  
 

Structures

PDB   Schematic diagram
3gnoA    
3gnrA    
3gnpA    
3wbeA    
3wbaA    

 

 Cluster 1 contains 5 ligand types

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Ligand Description


 
1. Ligand: GOL × 3
Glycerol
PDB codes: 3wba(A), 3wbe(A),


 
2. Ligand: GLC × 2
Alpha-D-Glucose
PDB codes: 3wba(A), 3wbe(A).


 
3. Ligand: G2F × 1
2-Deoxy-2-Fluoro-Alpha-D-Glucopyranose
PDB code: 3gnr(A).


 
4. Ligand: SOG × 1
2-Hydroxymethyl-6-Octylsulfanyl-Tetrahydro-Pyran-3,4,5- Triol
PDB code: 3gnp(A).


 
5. Ligand: TRS × 1
2-Amino-2-Hydroxymethyl-Propane-1,3-Diol
PDB code: 3gno(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 4
Glycerol
PDB codes: 3gno(A), 3gnp(A), 3wba(A), 3wbe(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
Glycerol
PDB code: 3gno(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 3
Glycerol
PDB codes: 3gno(A), 3gnp(A), 3gnr(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
Glycerol
PDB code: 3gno(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
Glycerol
PDB code: 3gno(A).

 

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