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PDBsum entry 3wa0

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 3wa0 calculated with MOLE 2.0 PDB id
3wa0
Pores calculated on whole structure Pores calculated excluding ligands

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12 pores, coloured by radius 12 pores, coloured by radius 12 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.90 2.03 32.0 -1.92 -0.62 28.5 88 2 3 1 3 0 1 0  
2 1.92 2.05 38.6 -0.68 -0.36 18.1 92 2 5 1 5 0 0 0  
3 1.79 1.83 45.4 -2.00 -0.79 23.3 87 1 6 4 2 0 0 0  
4 2.43 2.43 49.1 -1.09 -0.38 20.0 84 2 4 2 2 1 1 0  
5 2.66 2.90 52.1 -2.42 -0.30 39.7 75 5 5 0 2 2 0 0  
6 2.58 2.71 56.4 -1.72 -0.49 23.6 85 4 5 1 4 1 0 0  
7 1.74 4.62 88.6 -2.66 -0.66 32.4 81 5 11 6 6 0 1 0  
8 2.37 4.11 99.1 -2.35 -0.65 31.1 80 6 14 3 6 1 1 0  
9 1.73 4.74 101.2 -2.28 -0.60 31.0 80 8 12 6 5 0 2 0  
10 1.93 2.06 114.4 -2.31 -0.67 31.2 82 9 13 5 6 0 1 0  
11 1.29 1.51 33.9 -1.32 -0.19 6.1 77 3 1 5 4 3 0 0  
12 1.22 1.43 28.4 -1.06 -0.21 7.4 79 2 0 3 3 2 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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