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PDBsum entry 3w5e

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Hydrolase/hydrolase inhibitor PDB id
3w5e
Contents
Protein chains
345 a.a.
Ligands
NVW ×2
Metals
_CA ×2
_ZN ×2
Waters ×340

References listed in PDB file
Key reference
Title Identification of the fused bicyclic 4-Amino-2-Phenylpyrimidine derivatives as novel and potent pde4 inhibitors.
Authors T.Goto, A.Shiina, T.Yoshino, K.Mizukami, K.Hirahara, O.Suzuki, Y.Sogawa, T.Takahashi, T.Mikkaichi, N.Nakao, M.Takahashi, M.Hasegawa, S.Sasaki.
Ref. Bioorg Med Chem Lett, 2013, 23, 3325-3328. [DOI no: 10.1016/j.bmcl.2013.03.104]
PubMed id 23602400
Abstract
2-Phenyl-4-piperidinyl-6,7-dihydrothieno[3,4-d]pyrimidine derivative (2) was found to be a new PDE4 inhibitor with moderate PDE4B activity (IC50=150nM). A number of derivatives with a variety of 4-amino substituents and fused bicyclic pyrimidines were synthesized. Among these, 5,5-dioxo-7,8-dihydro-6H-thiopyrano[3,2-d]pyrimidine derivative (18) showed potent PDE4B inhibitory activity (IC50=25 nM). Finally, N-propylacetamide derivative (31b) was determined as a potent inhibitor for both PDE4B (IC50=7.5nM) and TNF-α production in mouse splenocytes (IC50=9.8nM) and showed good in vivo anti-inflammatory activity in the LPS-induced lung inflammation model in mice (ID50=18mg/kg). The binding mode of the new inhibitor (31e) in the catalytic site of PDE4B is presented based on an X-ray crystal structure of the ligand-enzyme complex.
PROCHECK
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 Headers

 

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