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PDBsum entry 3w3n
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Pore analysis for: 3w3n calculated with  MOLE 2.0
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PDB id
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3w3n
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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10 pores,
coloured by radius |
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15 pores,
coloured by radius
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15 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.29 |
1.29 |
38.0 |
-1.77 |
-0.36 |
28.3 |
81 |
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9 |
2 |
1 |
3 |
0 |
0 |
0 |
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2 |
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2.13 |
4.69 |
51.0 |
-2.32 |
-0.39 |
22.0 |
87 |
6 |
3 |
8 |
3 |
3 |
0 |
0 |
NAG 1 D NAG 2 D BMA 3 D NAG 1 E NAG 2 E
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3 |
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2.13 |
3.40 |
51.1 |
-1.69 |
-0.02 |
23.6 |
83 |
7 |
3 |
6 |
5 |
4 |
0 |
0 |
NAG 1 G NAG 2 G BMA 3 G NAG 1 H NAG 2 H BMA 3 H M
AN 4 H
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4 |
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1.44 |
1.81 |
51.2 |
-1.29 |
-0.44 |
12.5 |
84 |
3 |
2 |
5 |
2 |
1 |
1 |
1 |
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5 |
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1.18 |
1.18 |
55.4 |
0.27 |
0.33 |
11.1 |
84 |
6 |
1 |
3 |
7 |
6 |
1 |
0 |
RX8 1020 A NAG 2 G BMA 3 G
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6 |
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2.32 |
4.52 |
59.2 |
-3.03 |
-0.46 |
27.6 |
87 |
11 |
0 |
7 |
0 |
3 |
0 |
0 |
NAG 1 D NAG 2 D BMA 3 D NAG 1 G NAG 2 G BMA 3 G
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7 |
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1.31 |
1.31 |
63.3 |
-2.01 |
-0.44 |
26.7 |
79 |
13 |
5 |
3 |
2 |
4 |
0 |
0 |
BMA 3 D
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8 |
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1.20 |
1.41 |
65.0 |
-0.55 |
-0.22 |
7.7 |
81 |
1 |
1 |
5 |
5 |
4 |
3 |
0 |
NAG 1009 A RX8 1020 A
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9 |
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1.21 |
1.50 |
69.0 |
0.51 |
0.21 |
3.3 |
79 |
2 |
1 |
5 |
7 |
6 |
3 |
2 |
RX8 1020 A
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10 |
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1.20 |
1.36 |
71.0 |
0.56 |
0.25 |
7.8 |
77 |
3 |
2 |
4 |
8 |
8 |
1 |
0 |
RX8 901 B
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11 |
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1.18 |
1.18 |
71.8 |
-0.49 |
0.15 |
14.4 |
85 |
6 |
3 |
6 |
9 |
6 |
1 |
0 |
RX8 1020 A NAG 1 G NAG 2 G BMA 3 G NAG 1 H NAG 2
H BMA 3 H MAN 4 H
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12 |
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1.22 |
1.19 |
95.6 |
-0.26 |
0.12 |
12.2 |
79 |
7 |
1 |
6 |
7 |
9 |
2 |
0 |
NAG 1009 A RX8 1020 A NAG 2 G BMA 3 G
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13 |
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1.19 |
1.20 |
109.3 |
-0.03 |
0.03 |
6.3 |
77 |
3 |
1 |
8 |
8 |
9 |
3 |
2 |
NAG 1009 A RX8 1020 A
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14 |
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1.86 |
2.09 |
208.1 |
-1.30 |
-0.26 |
16.8 |
80 |
16 |
7 |
13 |
8 |
9 |
2 |
1 |
NAG 910 B NAG 916 B
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15 |
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1.45 |
2.15 |
39.0 |
-2.83 |
-0.42 |
32.8 |
87 |
7 |
2 |
3 |
2 |
0 |
1 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program