PDBsum entry 3w3k Go to PDB code:  Pore analysis for: 3w3k calculated with MOLE 2.0 PDB id 3w3k Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   12 pores, coloured by radius 9 pores, coloured by radius 9 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.42 2.64 54.2 -1.41 -0.02 22.6 84 6 4 5 7 4 0 0  NAG 1 G NAG 2 G NAG 1 H NAG 2 H 2 2.39 4.24 68.5 -2.14 -0.37 21.4 88 8 3 9 6 3 0 0  NAG 1 D NAG 2 D BMA 3 D NAG 1 G NAG 2 G NAG 1 H N AG 2 H 3 1.42 2.69 71.6 -1.21 -0.01 18.4 86 10 1 6 8 3 0 0  NAG 1 D NAG 2 D BMA 3 D NAG 2 G 4 1.18 1.25 73.5 -1.55 -0.23 27.0 86 9 2 5 5 0 1 0  MAN 4 F MAN 4 H 5 1.21 1.23 85.2 -1.28 -0.28 18.8 77 7 5 5 2 7 1 0  NAG 1 F NAG 2 F BMA 3 F MAN 4 F MAN 5 F NAG 2 G M AN 4 H 6 1.49 1.49 87.4 -0.62 -0.06 17.0 79 11 3 6 5 7 0 0  NAG 1 F NAG 2 F BMA 3 F MAN 5 F NAG 2 G 7 1.18 1.23 92.6 -1.45 -0.36 20.9 76 7 5 5 2 7 1 0  NAG 1 F NAG 2 F NAG 2 G MAN 4 H 8 1.20 1.24 110.2 -2.31 -0.37 27.4 81 10 7 7 6 5 1 0  NAG 1 G NAG 2 G NAG 1 H NAG 2 H MAN 4 H 9 1.15 1.14 143.8 0.43 0.33 9.5 82 5 2 9 13 12 5 0  L07 901 A NAG 910 A L07 901 B NAG 909 B Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.