PDBsum entry 3w3k Go to PDB code:  Tunnel analysis for: 3w3k calculated with MOLE 2.0 PDB id 3w3k Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   14 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.12 2.61 30.0 1.48 0.25 1.9 72 0 1 2 8 2 0 0   2 1.12 2.61 30.0 1.56 0.31 1.9 69 1 0 2 8 2 0 0   3 1.15 1.50 15.4 2.03 0.46 1.3 59 0 0 0 7 1 1 0   4 1.23 1.26 15.6 -1.40 -0.58 9.3 81 2 0 2 1 1 0 0   5 1.42 1.42 21.4 -0.15 -0.06 9.1 83 2 1 1 2 0 2 0   6 1.38 1.44 22.3 0.15 0.03 8.2 80 2 1 1 2 1 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.