PDBsum entry 3w13 Go to PDB code:  Tunnel analysis for: 3w13 calculated with MOLE 2.0 PDB id 3w13 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.31 1.31 15.1 -0.89 -0.62 7.6 88 2 1 2 3 0 0 0  NAG 1 G 2 1.29 1.59 17.8 -0.31 -0.25 6.3 81 1 0 2 3 0 0 1  NAG 406 E 3 1.32 1.32 22.1 -0.23 -0.27 7.8 87 1 0 1 4 0 0 1   4 2.05 2.83 16.8 -2.71 -0.24 30.6 82 4 2 3 0 2 2 0   5 1.45 1.58 16.1 0.12 0.52 4.5 70 1 0 0 3 2 0 1   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.