PDBsum entry 3vxf Go to PDB code:  Tunnel analysis for: 3vxf calculated with MOLE 2.0 PDB id 3vxf Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   0 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.41 1.45 26.1 -1.64 -0.70 21.1 75 5 4 0 0 3 1 0  DOD 1001 H DOD 1019 H DOD 1021 H DOD 1034 H DOD 1049 H DOD 1063 H DOD 1065 H DOD 1072 H 2 1.17 1.24 28.4 -1.53 -0.71 20.0 75 5 4 0 0 3 0 0  DOD 1001 H DOD 1019 H DOD 1021 H DOD 1034 H DOD 1049 H DOD 1063 H DOD 1065 H DOD 1072 H DOD 1097 H DOD 1100 H DOD 1138 H 3 1.24 2.03 23.0 -0.03 0.03 10.0 80 2 1 1 6 3 0 0  DOD 1010 H DOD 1018 H DOD 1036 H DOD 1037 H DOD 1054 H DOD 1055 H DOD 1068 H DOD 1089 H Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.