PDBsum entry 3vx4 Go to PDB code:  Tunnel analysis for: 3vx4 calculated with MOLE 2.0 PDB id 3vx4 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   2 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.55 1.56 32.5 -0.77 -0.44 7.1 85 3 0 5 5 2 1 0   2 1.54 1.94 32.9 -0.86 -0.46 7.2 86 3 0 5 3 2 1 0   3 1.50 2.06 33.3 -0.88 -0.56 7.9 90 4 0 7 5 1 1 0   4 1.49 1.99 33.7 -0.86 -0.55 7.9 91 4 0 7 3 1 1 0   5 1.56 1.61 42.7 -0.79 -0.40 10.3 89 4 0 4 7 2 1 0  ATP 801 D MG 802 D 6 1.58 1.58 43.1 -0.82 -0.39 10.7 90 4 0 4 5 2 1 0  ATP 801 D MG 802 D Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.