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PDBsum entry 3vx1

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Cleft analysis for: 3vx1 PDB id
3vx1
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 2543.48 1.04 60.54 7 9.67 1 14.15 1 8 4 12 11 4 6 2  
2 2445.19 0.00 66.99 2 8.86 3 9.23 2 7 9 7 8 11 4 0  
3 1271.53 0.00 67.88 1 6.90 5 7.70 4 2 5 10 8 5 2 0 NAG 1001[A] (5 atoms)
4 647.16 0.00 60.53 8 9.16 2 9.09 3 0 1 8 3 0 1 2  
5 657.28 0.00 58.37 9 8.58 4 7.62 5 1 2 4 5 1 5 0  
6 185.62 0.00 64.56 3 4.43 8 6.84 7 1 1 2 0 1 0 2  
7 311.77 0.00 61.47 5 5.44 7 6.02 9 0 2 4 2 1 4 0  
8 248.48 0.00 48.93 10 5.50 6 6.50 8 1 3 0 3 0 0 0  
9 253.12 0.00 60.98 6 3.26 10 7.47 6 1 1 3 4 0 2 0  
10 226.97 0.00 62.46 4 3.32 9 0.00 10 0 3 4 1 0 1 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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