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PDBsum entry 3vw8

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Transferase/transferase inhibitor PDB id
3vw8
Contents
Protein chain
303 a.a.
Ligands
DF6
Metals
_CL
Waters ×143

References listed in PDB file
Key reference
Title Structure-Based design, Synthesis, And evaluation of imidazo[1,2-B]pyridazine and imidazo[1,2-A]pyridine derivatives as novel dual c-Met and vegfr2 kinase inhibitors.
Authors S.Matsumoto, N.Miyamoto, T.Hirayama, H.Oki, K.Okada, M.Tawada, H.Iwata, K.Nakamura, S.Yamasaki, H.Miki, A.Hori, S.Imamura.
Ref. Bioorg Med Chem Lett, 2013, 21, 7686-7698. [DOI no: 10.1016/j.bmc.2013.10.028]
PubMed id 24216091
Abstract
To identify compounds with potent antitumor efficacy for various human cancers, we aimed to synthesize compounds that could inhibit c-mesenchymal epithelial transition factor (c-Met) and vascular endothelial growth factor receptor 2 (VEGFR2) kinases. We designed para-substituted inhibitors by using co-crystal structural information from c-Met and VEGFR2 in complex with known inhibitors. This led to the identification of compounds 3a and 3b, which were capable of suppressing both c-Met and VEGFR2 kinase activities. Further optimization resulted in pyrazolone and pyridone derivatives, which could form intramolecular hydrogen bonds to enforce a rigid conformation, thereby producing potent inhibition. One compound of particular note was the imidazo[1,2-a]pyridine derivative (26) bearing a 6-methylpyridone ring, which strongly inhibited both c-Met and VEGFR2 enzyme activities (IC50=1.9, 2.2nM), as well as proliferation of c-Met-addicted MKN45 cells and VEGF-stimulated human umbilical vein endothelial cells (IC50=5.0, 1.8nM). Compound 26 exhibited dose-dependent antitumor efficacy in vivo in MKN45 (treated/control ratio [T/C]=4%, po, 5mg/kg, once-daily) and COLO205 (T/C=13%, po, 15mg/kg, once-daily) mouse xenograft models.
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