PDBsum entry 3vu4 Go to PDB code:  Tunnel analysis for: 3vu4 calculated with MOLE 2.0 PDB id 3vu4 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.31 1.45 27.6 -1.09 -0.34 20.3 80 6 3 1 3 1 0 0   2 1.29 1.47 34.7 -1.30 -0.54 14.6 83 4 3 4 3 1 0 0  SO4 402 B 3 1.31 1.45 47.5 -1.48 -0.54 17.2 85 6 3 5 2 1 0 0  SO4 401 A SO4 402 B 4 1.31 1.47 58.4 -1.39 -0.55 18.2 85 4 9 4 4 2 0 0  SO4 402 B 5 1.21 1.27 16.4 -2.17 -0.36 13.4 80 1 3 4 0 2 0 0   6 1.21 1.27 16.4 -1.59 -0.06 13.0 78 2 3 4 1 3 0 0   7 1.21 1.27 25.1 -1.45 -0.10 13.1 80 2 2 6 1 3 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.