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PDBsum entry 3vs4
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Pore analysis for: 3vs4 calculated with  MOLE 2.0
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PDB id
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3vs4
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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7 pores,
coloured by radius |
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8 pores,
coloured by radius
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8 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.75 |
2.41 |
30.5 |
-1.23 |
-0.45 |
11.3 |
88 |
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3 |
3 |
7 |
2 |
1 |
1 |
0 |
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2 |
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3.36 |
3.36 |
32.1 |
-1.58 |
-0.51 |
16.9 |
86 |
3 |
2 |
6 |
2 |
1 |
1 |
0 |
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3 |
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3.30 |
3.29 |
36.6 |
-1.69 |
-0.56 |
18.1 |
87 |
3 |
3 |
8 |
2 |
1 |
1 |
0 |
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4 |
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1.75 |
2.41 |
40.2 |
-1.63 |
-0.39 |
16.3 |
78 |
4 |
5 |
5 |
2 |
2 |
1 |
0 |
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5 |
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1.52 |
2.69 |
119.2 |
-1.02 |
-0.13 |
20.3 |
80 |
7 |
6 |
5 |
8 |
4 |
2 |
0 |
VSF 603 A
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6 |
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1.67 |
2.37 |
135.2 |
-2.13 |
-0.67 |
23.4 |
86 |
5 |
6 |
8 |
3 |
1 |
1 |
0 |
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7 |
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1.19 |
2.42 |
161.4 |
-0.99 |
-0.21 |
18.3 |
83 |
10 |
12 |
11 |
15 |
5 |
0 |
0 |
VSF 603 B
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8 |
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1.71 |
2.39 |
172.6 |
-1.94 |
-0.51 |
23.6 |
84 |
11 |
11 |
11 |
3 |
4 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program