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Ligand clusters for UniProt code P49917

Ligand clusters for P49917: DNA ligase 4 OS=Homo sapiens GN=LIG4 PE=1 SV=2

Top 6 (of 28) ligand clusters
Cluster 1.
1 ligand type
2 ligands
Cluster 2.
3 ligand types
8 ligands
Cluster 3.
2 ligand types
4 ligands
Cluster 4.
1 ligand type
3 ligands
Cluster 5.
1 ligand type
3 ligands
Cluster 6.
1 ligand type
4 ligands
Representative protein: 3w1bA  
 

Structures

PDB   Schematic diagram
3w1bA    
3w1gA    
3w5oA    

 

 Cluster 1 contains 1 ligand type

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Ligand Description


 
1. Ligand: VAL-PRO-GLN-TRP-GLU-VAL-PHE-PHE-LYS-ARG × 2
PDB codes: 3w1b(A), 3w1g(A).

 

 Cluster 2 contains 3 ligand types

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Ligand Description


 
1. Ligand: ATP × 2
adenosine triphosphate
Adenosine-5'-Triphosphate
PDB codes: 3w1g(A), 3w5o(A).


 
2. Ligand: SO4 × 5
Sulfate ion
PDB codes: 3w1b(A), 3w1g(A), 3w5o(A).


 
3. Ligand: AMP × 1
Adenosine monophosphate
PDB code: 3w1b(A).

 

 Cluster 3 contains 2 ligand types

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Ligand Description


 
1. Ligand: SO4 × 2
Sulfate ion
PDB codes: 3w1g(A), 3w5o(A).

_Hg
 
2. Metal: _HG × 2
PDB codes: 3w1b(A),

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 3
Sulfate ion
PDB codes: 3w1b(A), 3w1g(A), 3w5o(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 3
Sulfate ion
PDB codes: 3w1b(A), 3w1g(A), 3w5o(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 4
Sulfate ion
PDB codes: 3w1b(A), 3w1g(A), 3w5o(A).

 

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