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PDBsum entry 3vnn

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Cleft analysis for: 3vnn PDB id
3vnn
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 2312.30 2.92 57.80 5 12.25 1 13.57 1 4 4 5 5 5 3 1  
2 792.70 0.00 60.75 4 7.59 4 7.05 6 3 2 5 6 2 1 0  
3 747.14 0.00 52.39 9 6.83 5 9.33 2 2 1 6 4 1 1 0  
4 359.02 0.00 68.47 1 8.71 3 9.10 3 3 3 2 2 2 1 0  
5 301.64 0.00 54.48 8 8.81 2 8.08 4 2 0 3 1 1 0 0  
6 305.44 0.00 64.21 2 3.49 9 6.81 7 4 1 3 2 1 1 0  
7 333.28 0.00 60.90 3 4.03 7 5.24 9 3 2 2 7 0 0 0  
8 170.86 0.00 57.20 7 4.03 8 7.95 5 0 2 2 2 1 1 0  
9 179.72 0.00 57.65 6 5.22 6 4.17 10 3 1 2 2 2 0 0  
10 159.89 0.00 50.22 10 2.02 10 5.49 8 1 0 4 1 1 0 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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